Transcript: ENST00000533239.1 DDX6-005

Description

DEAD (Asp-Glu-Ala-Asp) box helicase 6 [Source:HGNC Symbol;Acc:2747]

Gene Synonyms

HLR2, P54, RCK

Location

Chromosome 11: 118,656,542-118,661,858 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 3125 variant alleles and maps to 68 oligo probes.

Gene

This transcript is a product of gene ENSG00000110367.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264018.4	DDX6-001	4538	483aa	ENSP00000264018.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44751	B2R858 P26196	NM_004397.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534980.1	DDX6-201	2541	483aa	ENSP00000442266.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44751	B2R858 P26196	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000526070.2	DDX6-002	1936	483aa	ENSP00000433704.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44751	B2R858 P26196	NM_001257191.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531971.1	DDX6-006	4373	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000529162.1	DDX6-004	1795	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000525082.1	DDX6-003	1232	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533239.1	DDX6-005	738	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 738 bps,

Version

ENST00000533239.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000389650 (version 1)

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Transcript: ENST00000533239.1 DDX6-005

Summary