Transcript: ENST00000561996.1 CPT1A-007

Description

carnitine palmitoyltransferase 1A (liver) [Source:HGNC Symbol;Acc:2328]

Gene Synonyms

CPT1, CPT1-L, L-CPT1

Location

Chromosome 11: 68,579,906-68,611,878 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 3 domains and features, is associated with 14727 variant alleles and maps to 42 oligo probes.

Gene

This transcript is a product of gene ENSG00000110090.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000265641.5	CPT1A-006	5232	773aa	ENSP00000265641.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8185	H3BP22 H3BUJ0 H3BUV7 P50416 Q8WZ48	NM_001876.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376618.2	CPT1A-201	2635	756aa	ENSP00000365803.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31624	H3BP22 H3BUJ0 H3BUV7 P50416	NM_001031847.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540367.1	CPT1A-001	2496	756aa	ENSP00000439084.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31624	H3BP22 H3BUJ0 H3BUV7 P50416	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539743.1	CPT1A-002	2382	773aa	ENSP00000446108.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8185	H3BP22 H3BUJ0 H3BUV7 P50416 Q8WZ48	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538994.1	CPT1A-004	617	78aa	ENSP00000454332.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BMD2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561996.1	CPT1A-007	559	93aa	ENSP00000457663.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BUJ0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000565318.1	CPT1A-009	511	134aa	ENSP00000457826.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BP22 H3BUJ0 H3BUV7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000569129.1	CPT1A-008	499	117aa	ENSP00000455116.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BP22 H3BUJ0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000537756.2	CPT1A-005	585	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 559 bps, Translation length: 93 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000561996.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000421712 (version 1)

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Transcript: ENST00000561996.1 CPT1A-007

Summary