Transcript: ENST00000226798.4 FRG1-001

Description

FSHD region gene 1 [Source:HGNC Symbol;Acc:3954]

Gene Synonyms

FRG1A, FSG1

Location

Chromosome 4: 190,861,943-190,884,359 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 6 domains and features, is associated with 12326 variant alleles and maps to 792 oligo probes.

Gene

This transcript is a product of gene ENSG00000109536.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000226798.4	FRG1-001	1074	258aa	ENSP00000226798.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34121	E9PRR7 Q14331	NM_004477.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524583.1	FRG1-006	755	102aa	ENSP00000435067.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PLY7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000531991.2	FRG1-008	738	116aa	ENSP00000435943.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PRR7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000533157.1	FRG1-007	714	42aa	ENSP00000436535.1	Nonsense mediated decay		E9PI42	-	-
ENST00000507103.1	FRG1-003	421	84aa	ENSP00000462603.1	Nonsense mediated decay		J3KSQ7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000514482.1	FRG1-005	838	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505327.1	FRG1-002	340	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,074 bps, Translation length: 258 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q14331

CCDS

This transcript is a member of the Human CCDS set: CCDS34121

Version

ENST00000226798.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000359622 (version 4)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000226798.4 FRG1-001

Summary