Transcript: ENST00000572438.1 CHRNE-002

Description

cholinergic receptor, nicotinic, epsilon (muscle) [Source:HGNC Symbol;Acc:1966]

Gene Synonyms

ACHRE, CMS1D, CMS1E, CMS2A, FCCMS, SCCMS

Location

About this transcript

This transcript has 7 exons, is associated with 3407 variant alleles and maps to 351 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000293780.4	CHRNE-001	2455	493aa	ENSP00000293780.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11058	Q04844 Q8N731	NM_000080.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000575637.1	CHRNE-003	557	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000572438.1	CHRNE-002	1847	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 1,847 bps,

Version

ENST00000572438.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000439887 (version 1)