Transcript: ENST00000417581.1 MTPAP-003

Description

mitochondrial poly(A) polymerase [Source:HGNC Symbol;Acc:25532]

Gene Synonyms

FLJ10486, PAPD1, SPAX4, mtPAP

Location

Chromosome 10: 30,615,493-30,637,906 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 4 domains and features, is associated with 9549 variant alleles and maps to 157 oligo probes.

Gene

This transcript is a product of gene ENSG00000107951.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263063.4	MTPAP-001	5601	582aa	ENSP00000263063.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7165	Q5T852 Q9NVV4	NM_018109.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000358107.4	MTPAP-201	5947	712aa	ENSP00000350820.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T852 Q9NVV4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000417581.1	MTPAP-003	816	219aa	ENSP00000404392.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T852	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000421701.1	MTPAP-004	695	150aa	ENSP00000394118.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T851	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000488290.1	MTPAP-002	4103	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471055.1	MTPAP-005	2071	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 816 bps, Translation length: 219 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000417581.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000047428 (version 1)

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Transcript: ENST00000417581.1 MTPAP-003

Summary