Transcript: ENST00000370220.1 LZTS2-001

Description

leucine zipper, putative tumor suppressor 2 [Source:HGNC Symbol;Acc:29381]

Gene Synonyms

KIAA1813, LAPSER1

Location

Chromosome 10: 102,759,233-102,767,593 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 24 domains and features, is associated with 4275 variant alleles and maps to 556 oligo probes.

Gene

This transcript is a product of gene ENSG00000107816.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000370220.1	LZTS2-001	5741	669aa	ENSP00000359240.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7507	B1AL11 B1AL12 B1AL13 Q9BRK4 Q9BRY6 S4R3W7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370223.3	LZTS2-002	2883	669aa	ENSP00000359243.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7507	B1AL11 B1AL12 B1AL13 Q9BRK4 Q9BRY6 S4R3W7	NM_032429.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000426584.1	LZTS2-004	816	240aa	ENSP00000407713.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AL11 B1AL12 B1AL13 S4R3W7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000454422.1	LZTS2-006	804	220aa	ENSP00000416972.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AL11 B1AL12 S4R3W7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000481129.1	LZTS2-008	745	136aa	ENSP00000474819.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R3W7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000429732.1	LZTS2-007	701	198aa	ENSP00000402042.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AL11 S4R3W7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000489526.1	LZTS2-005	802	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 5,741 bps, Translation length: 669 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BRK4

CCDS

This transcript is a member of the Human CCDS set: CCDS7507

Version

ENST00000370220.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000049872 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000370220.1 LZTS2-001

Summary