Transcript: ENST00000479461.1 PRKAG2-017

Description

protein kinase, AMP-activated, gamma 2 non-catalytic subunit [Source:HGNC Symbol;Acc:9386]

Gene Synonyms

AAKG, AAKG2, CMH6, H91620p, WPWS

Location

Chromosome 7: 151,254,079-151,261,399 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 3340 variant alleles and maps to 288 oligo probes.

Gene

This transcript is a product of gene ENSG00000106617.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000287878.4	PRKAG2-001	3305	569aa	ENSP00000287878.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5928	C9JUG1 Q9UGJ0	NM_016203.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000492843.1	PRKAG2-004	2699	445aa	ENSP00000419577.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JUG1 E9PGP6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000433631.2	PRKAG2-201	2645	444aa	ENSP00000406544.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G8JLM0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000418337.2	PRKAG2-002	2318	328aa	ENSP00000387386.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47752	C9JUG1 Q9UGJ0	NM_024429.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392801.2	PRKAG2-003	2281	525aa	ENSP00000376549.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43683	C9JUG1 Q9UGJ0	NM_001040633.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000476632.1	PRKAG2-010	1123	163aa	ENSP00000419493.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JUG1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000488258.1	PRKAG2-006	1413	229aa	ENSP00000420783.1	Nonsense mediated decay		F8WDA1	-	-
ENST00000493872.1	PRKAG2-012	573	52aa	ENSP00000417252.1	Nonsense mediated decay		F8WAY3	-	-
ENST00000478989.1	PRKAG2-015	564	118aa	ENSP00000420645.1	Nonsense mediated decay		F8WDB5	-	-
ENST00000461529.1	PRKAG2-008	575	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487375.1	PRKAG2-009	562	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474383.1	PRKAG2-007	510	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481434.1	PRKAG2-005	1670	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000491938.1	PRKAG2-014	653	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000479461.1	PRKAG2-017	570	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000483775.1	PRKAG2-013	539	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485183.1	PRKAG2-016	480	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 570 bps,

Version

ENST00000479461.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000348456 (version 1)

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Transcript: ENST00000479461.1 PRKAG2-017

Summary