Transcript: ENST00000415798.1 COA1-013

Description

cytochrome c oxidase assembly factor 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:21868]

Gene Synonyms

C7orf44, FLJ10803, MITRAC15

Location

Chromosome 7: 43,680,172-43,769,122 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 2 domains and features, is associated with 38295 variant alleles and maps to 207 oligo probes.

Gene

This transcript is a product of gene ENSG00000106603.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000395879.1	COA1-004	2448	146aa	ENSP00000379218.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5471	C9J6J1 C9JA07 Q9GZY4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000310564.6	COA1-003	1085	146aa	ENSP00000312100.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5471	C9J6J1 C9JA07 Q9GZY4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395880.3	COA1-202	893	146aa	ENSP00000379219.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5471	C9J6J1 C9JA07 Q9GZY4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000223336.6	COA1-201	857	146aa	ENSP00000223336.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5471	C9J6J1 C9JA07 Q9GZY4	NM_018224.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431651.1	COA1-015	720	88aa	ENSP00000417046.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J6J1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000415798.1	COA1-013	524	113aa	ENSP00000405582.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J6J1 C9JA07	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000438444.1	COA1-001	3223	146aa	ENSP00000395586.1	Nonsense mediated decay	CCDS5471	C9J6J1 C9JA07 Q9GZY4	-	-
ENST00000415076.2	COA1-007	1737	146aa	ENSP00000400759.1	Nonsense mediated decay	CCDS5471	C9J6J1 C9JA07 Q9GZY4	-	-
ENST00000448704.1	COA1-010	1599	34aa	ENSP00000400271.1	Nonsense mediated decay		F2Z2D1	-	-
ENST00000446330.2	COA1-002	1520	146aa	ENSP00000416406.1	Nonsense mediated decay	CCDS5471	C9J6J1 C9JA07 Q9GZY4	-	-
ENST00000418140.1	COA1-011	1372	63aa	ENSP00000410365.1	Nonsense mediated decay		F2Z2J3	-	-
ENST00000446564.1	COA1-012	1177	146aa	ENSP00000413777.1	Nonsense mediated decay	CCDS5471	C9J6J1 C9JA07 Q9GZY4	-	-
ENST00000451651.1	COA1-018	585	41aa	ENSP00000411540.1	Nonsense mediated decay		F8WBS2	-	-
ENST00000420441.1	COA1-014	547	34aa	ENSP00000398886.1	Nonsense mediated decay		F2Z2D1	-	-
ENST00000457939.1	COA1-016	406	63aa	ENSP00000387433.1	Nonsense mediated decay		F2Z2J3	-	-
ENST00000488813.1	COA1-005	1641	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000459713.1	COA1-009	574	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470156.1	COA1-008	569	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478504.1	COA1-017	552	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490251.1	COA1-006	2135	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 524 bps, Translation length: 113 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000415798.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000338850 (version 7)

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Transcript: ENST00000415798.1 COA1-013

Summary