Transcript: ENST00000415871.1 TSPAN12-002

Description

tetraspanin 12 [Source:HGNC Symbol;Acc:21641]

Gene Synonyms

EVR5, NET-2, NET2, TM4SF12

Location

Chromosome 7: 120,428,428-120,498,377 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 15 domains and features, is associated with 27641 variant alleles and maps to 369 oligo probes.

Gene

This transcript is a product of gene ENSG00000106025.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000222747.3	TSPAN12-001	2796	305aa	ENSP00000222747.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5777	C9IZ82 C9J9U1 C9JC05 C9JQM0 O95859	NM_012338.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415871.1	TSPAN12-002	1495	305aa	ENSP00000397699.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5777	C9IZ82 C9J9U1 C9JC05 C9JQM0 O95859	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000430985.1	TSPAN12-004	693	95aa	ENSP00000388819.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JQM0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000424710.1	TSPAN12-006	569	112aa	ENSP00000404942.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JC05 C9JQM0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000441017.1	TSPAN12-007	551	147aa	ENSP00000411158.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9IZ82 C9J9U1 C9JC05 C9JQM0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000433758.1	TSPAN12-005	551	120aa	ENSP00000399059.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9IZ82 C9JC05 C9JQM0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000450414.1	TSPAN12-003	1167	42aa	ENSP00000397411.1	Nonsense mediated decay		H7C0X9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 7, Transcript length: 1,495 bps, Translation length: 305 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O95859

CCDS

This transcript is a member of the Human CCDS set: CCDS5777

Version

ENST00000415871.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000346952 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000415871.1 TSPAN12-002

Summary