Transcript: ENST00000222718.5 HOXA2-001

Description

homeobox A2 [Source:HGNC Symbol;Acc:5103]

Gene Synonyms

HOX1K, MCOHI

Location

About this transcript

This transcript has 2 exons, is annotated with 16 domains and features, is associated with 1618 variant alleles and maps to 320 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000222718.5	HOXA2-001	2066	376aa	ENSP00000222718.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5403	O43364	NM_006735.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 2,066 bps, Translation length: 376 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43364

CCDS

This transcript is a member of the Human CCDS set: CCDS5403

Version

ENST00000222718.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000358508 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.