Transcript: ENST00000471085.1 ATP6V0A4-006

Description

ATPase, H+ transporting, lysosomal V0 subunit a4 [Source:HGNC Symbol;Acc:866]

Gene Synonyms

A4, ATP6N1B, ATP6N2, RDRTA2, RTA1C, RTADR, STV1, Stv1, VPH1, VPP2, Vph1, a4

Location

Chromosome 7: 138,418,933-138,432,420 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 6865 variant alleles and maps to 67 oligo probes.

Gene

This transcript is a product of gene ENSG00000105929.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000310018.2	ATP6V0A4-001	3135	840aa	ENSP00000308122.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5849	Q9HBG4	NM_130840.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393054.1	ATP6V0A4-201	3090	840aa	ENSP00000376774.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5849	Q9HBG4	NM_130841.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000353492.4	ATP6V0A4-002	2709	840aa	ENSP00000253856.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5849	Q9HBG4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000483139.1	ATP6V0A4-004	764	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479909.1	ATP6V0A4-003	527	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471085.1	ATP6V0A4-006	318	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478480.1	ATP6V0A4-005	963	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 318 bps,

Version

ENST00000471085.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000347807 (version 1)

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Transcript: ENST00000471085.1 ATP6V0A4-006

Summary