Transcript: ENST00000527031.1 JAK3-004

Description

Janus kinase 3 [Source:HGNC Symbol;Acc:6193]

Gene Synonyms

JAK-3, JAK3_HUMAN, JAKL, L-JAK, LJAK

Location

Chromosome 19: 17,935,589-17,958,800 reverse strand.

About this transcript

This transcript has 14 exons, is associated with 14715 variant alleles and maps to 429 oligo probes.

Gene

This transcript is a product of gene ENSG00000105639.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000458235.1	JAK3-201	5432	1124aa	ENSP00000391676.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12366	P52333 Q6LD09 Q9UMU1	NM_000215.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527670.1	JAK3-005	3996	1124aa	ENSP00000432511.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12366	P52333 Q6LD09 Q9UMU1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534444.1	JAK3-001	3612	1094aa	ENSP00000436421.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P52333 Q6LD09	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000526008.1	JAK3-003	1776	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000527031.1	JAK3-004	2809	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000528293.1	JAK3-002	1173	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000528705.1	JAK3-006	843	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 0, Transcript length: 2,809 bps,

Version

ENST00000527031.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000385548 (version 1)

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Transcript: ENST00000527031.1 JAK3-004

Summary