Transcript: ENST00000523579.1 CARD8-025

Description

caspase recruitment domain family, member 8 [Source:HGNC Symbol;Acc:17057]

Gene Synonyms

CARDINAL, DACAR, DAKAR, Dakar, KIAA0955, NDPP, NDPP1, TUCAN

Location

Chromosome 19: 48,715,084-48,733,755 reverse strand.

About this transcript

This transcript has 6 exons, is associated with 8345 variant alleles and maps to 289 oligo probes.

Gene

This transcript is a product of gene ENSG00000105483.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000391898.3	CARD8-203	5263	537aa	ENSP00000375767.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54289	E5RFV9 E5RGG3 Q9Y2G2	NM_001184900.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000359009.4	CARD8-202	5215	431aa	ENSP00000351901.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9Y2G2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000447740.2	CARD8-204	5210	487aa	ENSP00000391248.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12712	E5RJG3 Q9Y2G2	NM_001184901.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520753.1	CARD8-002	3041	392aa	ENSP00000429839.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54288	E5RFV9 E5RGG3 Q9Y2G2	NM_001184902.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520153.1	CARD8-007	2617	487aa	ENSP00000428736.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12712	E5RJG3 Q9Y2G2	NM_014959.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519940.1	CARD8-009	2056	537aa	ENSP00000428883.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54289	E5RFV9 E5RGG3 Q9Y2G2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520015.1	CARD8-005	1931	392aa	ENSP00000430747.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54288	E5RFV9 E5RGG3 Q9Y2G2	NM_001184903.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000521613.1	CARD8-004	1903	487aa	ENSP00000427858.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12712	E5RJG3 Q9Y2G2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357778.5	CARD8-201	1890	189aa	ENSP00000350423.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z7N9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522431.1	CARD8-022	622	70aa	ENSP00000427922.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54287	E5RFV9 E5RGG3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520007.1	CARD8-019	614	70aa	ENSP00000427727.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54287	E5RFV9 E5RGG3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000521437.1	CARD8-020	579	39aa	ENSP00000430178.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGG3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000522889.1	CARD8-021	567	43aa	ENSP00000430567.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJG3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000519332.1	CARD8-003	500	70aa	ENSP00000430108.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54287	E5RFV9 E5RGG3	NM_001184904.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518622.1	CARD8-001	5063	82aa	ENSP00000430057.1	Nonsense mediated decay		E5RGC9 E5RJG3	-	-
ENST00000518979.1	CARD8-014	3533	82aa	ENSP00000430495.1	Nonsense mediated decay		E5RGC9 E5RJG3	-	-
ENST00000522773.1	CARD8-008	2884	138aa	ENSP00000429362.1	Nonsense mediated decay		E5RFV9 E5RGG3 E5RIN1	-	-
ENST00000519646.1	CARD8-013	2587	146aa	ENSP00000430836.1	Nonsense mediated decay		E5RFV9 E5RGG3 E5RHZ3	-	-
ENST00000517510.1	CARD8-016	2016	82aa	ENSP00000428662.1	Nonsense mediated decay		E5RGC9 E5RJG3	-	-
ENST00000521415.1	CARD8-010	1709	132aa	ENSP00000428862.1	Nonsense mediated decay		E5RFI5 E5RFV9 E5RGG3	-	-
ENST00000518450.1	CARD8-017	1363	70aa	ENSP00000428975.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000519302.2	CARD8-024	751	132aa	ENSP00000429741.1	Nonsense mediated decay		E5RHJ3 E5RJG3	-	-
ENST00000523579.1	CARD8-025	673	24aa	ENSP00000430460.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000600800.1	CARD8-029	3203	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000523750.1	CARD8-026	633	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000517778.1	CARD8-012	620	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000522068.1	CARD8-018	573	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000522051.1	CARD8-006	4680	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000377461.4	CARD8-015	3325	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000518596.1	CARD8-011	1047	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000523668.1	CARD8-027	583	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000521092.1	CARD8-023	555	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 2, Transcript length: 673 bps, Translation length: 24 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000523579.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000381595 (version 1)

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Transcript: ENST00000523579.1 CARD8-025

Summary