Transcript: ENST00000596399.1 LIM2-002

Description

lens intrinsic membrane protein 2, 19kDa [Source:HGNC Symbol;Acc:6610]

Gene Synonyms

CTRCT19, MP17, MP19

Location

About this transcript

This transcript has 5 exons, is annotated with 17 domains and features, is associated with 3947 variant alleles and maps to 253 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000221973.3	LIM2-001	983	215aa	ENSP00000221973.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12831	P55344	NM_030657.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000596399.1	LIM2-002	861	173aa	ENSP00000472090.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59415	P55344	NM_001161748.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 861 bps, Translation length: 173 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P55344

CCDS

This transcript is a member of the Human CCDS set: CCDS59415

Version

ENST00000596399.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000464247 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.