Transcript: ENST00000574121.1 CCNE1-003

Description

cyclin E1 [Source:HGNC Symbol;Acc:1589]

Gene Synonyms

CCNE

Location

Chromosome 19: 30,312,639-30,315,187 forward strand.

About this transcript

This transcript has 4 exons, is associated with 1774 variant alleles and maps to 333 oligo probes.

Gene

This transcript is a product of gene ENSG00000105173.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262643.3	CCNE1-001	2043	410aa	ENSP00000262643.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12419	F6KX26 P24864	NM_001238.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357943.5	CCNE1-201	1807	367aa	ENSP00000350625.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J2U0 F6KX26	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000444983.2	CCNE1-002	1680	395aa	ENSP00000410179.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F6KX26 P24864	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000576532.1	CCNE1-005	1085	283aa	ENSP00000460881.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L413	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000575243.1	CCNE1-004	820	215aa	ENSP00000459024.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L1Q9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000574121.1	CCNE1-003	1295	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000586912.1	CCNE1-006	415	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,295 bps,

Version

ENST00000574121.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000438142 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000574121.1 CCNE1-003

Summary