Transcript: ENST00000312865.6 MED25-001

Description

mediator complex subunit 25 [Source:HGNC Symbol;Acc:28845]

Gene Synonyms

ACID1, ARC92, CMT2B2, DKFZp434K0512, P78, PTOV2, TCBAP0758, hsa-mir-6800

Location

Chromosome 19: 50,321,546-50,340,236 forward strand.

About this transcript

This transcript has 18 exons, is annotated with 17 domains and features, is associated with 10061 variant alleles and maps to 732 oligo probes.

Gene

This transcript is a product of gene ENSG00000104973.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000312865.6	MED25-001	2332	747aa	ENSP00000326767.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33075	Q71SY5	NM_030973.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538643.1	MED25-012	1623	534aa	ENSP00000437496.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q71SY5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000593767.1	MED25-023	829	248aa	ENSP00000470692.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000595185.1	MED25-016	760	253aa	ENSP00000470027.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QYR4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000594998.1	MED25-009	3339	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000593636.1	MED25-003	1012	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000593595.1	MED25-020	506	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000599722.1	MED25-021	504	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 2,332 bps, Translation length: 747 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q71SY5

CCDS

This transcript is a member of the Human CCDS set: CCDS33075

Version

ENST00000312865.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000465316 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000312865.6 MED25-001

Summary