Description
tRNA methyltransferase 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:25980]
Gene Synonyms
FLJ20244, TRM1
Location
Chromosome 19: 13,226,272-13,227,550 reverse strand.
About this transcript
This transcript has 4 exons, is annotated with 4 domains and features, is associated with 800 variant alleles and maps to 127 oligo probes.
Gene
This transcript is a product of gene ENSG00000104907.8 Show transcript tableHide transcript table
Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|---|
ENST00000592062.1 | TRMT1-001 | 2579 | 659aa | ENSP00000466967.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12293 | B4DHS5 B4E3A3 K7EJX9 K7EQY6 Q9NXH9 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000437766.1 | TRMT1-202 | 2263 | 659aa | ENSP00000416149.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12293 | B4DHS5 B4E3A3 K7EJX9 K7EQY6 Q9NXH9 | NM_017722.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000221504.8 | TRMT1-002 | 2179 | 630aa | ENSP00000221504.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45997 | K7EQY6 Q9NXH9 | NM_001142554.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000357720.4 | TRMT1-201 | 2142 | 659aa | ENSP00000350352.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12293 | B4DHS5 B4E3A3 K7EJX9 K7EQY6 Q9NXH9 | NM_001136035.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000592814.1 | TRMT1-019 | 985 | 297aa | ENSP00000467938.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EQQ8 K7EQY6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000587487.1 | TRMT1-012 | 813 | 191aa | ENSP00000465370.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EJX9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000588229.1 | TRMT1-020 | 552 | 145aa | ENSP00000467984.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EQU7 K7EQY6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000587633.1 | TRMT1-015 | 648 | 101aa | ENSP00000466716.1 | Nonsense mediated decay | K7EMZ2 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000591717.1 | TRMT1-007 | 582 | 105aa | ENSP00000466966.1 | Nonsense mediated decay | K7ENI9 K7EQY6 | - | - | |
ENST00000588746.1 | TRMT1-011 | 562 | 85aa | ENSP00000468031.1 | Nonsense mediated decay | K7EQY6 | - | - | |
ENST00000586224.1 | TRMT1-008 | 543 | 113aa | ENSP00000468377.1 | Nonsense mediated decay | K7ERR5 | - | - | |
ENST00000592892.1 | TRMT1-009 | 554 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000592729.1 | TRMT1-013 | 543 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000588813.1 | TRMT1-021 | 522 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000591425.1 | TRMT1-010 | 454 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000593257.1 | TRMT1-014 | 408 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000588511.1 | TRMT1-004 | 2251 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000593157.1 | TRMT1-003 | 2127 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000585622.1 | TRMT1-018 | 799 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000590812.1 | TRMT1-005 | 612 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000592606.1 | TRMT1-006 | 592 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000585435.1 | TRMT1-016 | 437 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000586830.1 | TRMT1-017 | 354 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |