Transcript: ENST00000590974.1 LYL1-003

Description

lymphoblastic leukemia derived sequence 1 [Source:HGNC Symbol;Acc:6734]

Gene Synonyms

BHLHA18, bHLHa18

Location

About this transcript

This transcript has 3 exons, is annotated with 2 domains and features, is associated with 1193 variant alleles and maps to 107 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264824.4	LYL1-001	1490	280aa	ENSP00000264824.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12292	K7ER61 P12980	NM_005583.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000590974.1	LYL1-003	902	57aa	ENSP00000468122.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ER61	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000590120.1	LYL1-002	1547	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 902 bps, Translation length: 57 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000590974.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000452828 (version 1)