Transcript: ENST00000509480.1 RELB-003

Description

v-rel avian reticuloendotheliosis viral oncogene homolog B [Source:HGNC Symbol;Acc:9956]

Gene Synonyms

I-REL, IREL, REL-B

Location

Chromosome 19: 45,504,719-45,515,487 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 1 domain and feature, is associated with 5632 variant alleles and maps to 108 oligo probes.

Gene

This transcript is a product of gene ENSG00000104856.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000221452.8	RELB-001	2294	579aa	ENSP00000221452.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46110	Q01201	NM_006509.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540120.1	RELB-201	2270	579aa	ENSP00000445542.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q01201	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000505236.1	RELB-002	2219	576aa	ENSP00000423287.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R992	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000589972.1	RELB-006	760	142aa	ENSP00000468460.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000509480.1	RELB-003	840	58aa	ENSP00000427348.1	Nonsense mediated decay		D6RIV7	-	-
ENST00000509229.1	RELB-005	775	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000510184.1	RELB-004	546	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 840 bps, Translation length: 58 residues

Version

ENST00000509480.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000367363 (version 1)

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Transcript: ENST00000509480.1 RELB-003

Summary