Transcript: ENST00000530200.1 MTMR9-003

Description

myotubularin related protein 9 [Source:HGNC Symbol;Acc:14596]

Gene Synonyms

C8orf9, DKFZp434K171, LIP-STYX, MTMR8

Location

About this transcript

This transcript has 11 exons, is annotated with 4 domains and features, is associated with 24592 variant alleles and maps to 470 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000221086.3	MTMR9-001	7472	549aa	ENSP00000221086.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5979	B7Z291 Q96QG7 Q9Y4N6	NM_015458.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000526292.1	MTMR9-002	1960	464aa	ENSP00000433239.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z291 Q9Y4N6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530200.1	MTMR9-003	3503	101aa	ENSP00000436046.1	Nonsense mediated decay		E9PR67	-	-
ENST00000528389.1	MTMR9-006	1283	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 3, Transcript length: 3,503 bps, Translation length: 101 residues

Version

ENST00000530200.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000383638 (version 1)