Transcript: ENST00000520643.1 SPAG1-002

Description

sperm associated antigen 1 [Source:HGNC Symbol;Acc:11212]

Gene Synonyms

CILD28, FLJ32920, HSD-3.8, SP75, TPIS

Location

Chromosome 8: 101,170,134-101,206,908 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 14 domains and features, is associated with 14031 variant alleles and maps to 243 oligo probes.

Gene

This transcript is a product of gene ENSG00000104450.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000388798.2	SPAG1-001	3852	926aa	ENSP00000373450.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34930	Q07617	NM_003114.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000251809.3	SPAG1-201	3747	926aa	ENSP00000251809.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34930	Q07617	NM_172218.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520508.1	SPAG1-004	1796	416aa	ENSP00000428070.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3XAM3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520643.1	SPAG1-002	1723	416aa	ENSP00000427716.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3XAM3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000523302.1	SPAG1-006	638	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000519409.1	SPAG1-003	450	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000519424.1	SPAG1-005	645	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 1,723 bps, Translation length: 416 residues

Version

ENST00000520643.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000379851 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000520643.1 SPAG1-002

Summary