Transcript: ENST00000560021.1 FAM189A1-004

Description

family with sequence similarity 189, member A1 [Source:HGNC Symbol;Acc:29075]

Gene Synonyms

KIAA0574, TMEM228

Location

About this transcript

This transcript has 8 exons, is associated with 33474 variant alleles and maps to 205 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261275.4	FAM189A1-001	4705	539aa	ENSP00000261275.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45198	H0YKM1 O60320	NM_015307.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560082.1	FAM189A1-003	533	78aa	ENSP00000452860.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YKM1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000560050.1	FAM189A1-002	544	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560021.1	FAM189A1-004	1380	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 0, Transcript length: 1,380 bps,

Version

ENST00000560021.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000417255 (version 1)