Transcript: ENST00000562145.1 FA2H-003

Description

fatty acid 2-hydroxylase [Source:HGNC Symbol;Acc:21197]

Gene Synonyms

FAAH, FAH1, FAXDC1, FLJ25287, SCS7, SPG35

Location

About this transcript

This transcript has 2 exons, is associated with 2165 variant alleles and maps to 270 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000219368.3	FA2H-001	2424	372aa	ENSP00000219368.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10911	B7Z8T6 Q7L5A8	NM_024306.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544337.1	FA2H-201	1537	159aa	ENSP00000442334.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z8T6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000569949.1	FA2H-004	578	192aa	ENSP00000464576.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QS89	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000567683.1	FA2H-002	1537	156aa	ENSP00000455126.1	Nonsense mediated decay		H3BP32	-	-
ENST00000562145.1	FA2H-003	2075	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 2,075 bps,

Version

ENST00000562145.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000434206 (version 1)