Transcript: ENST00000480854.1 KATNAL1-005

Description

katanin p60 subunit A-like 1 [Source:HGNC Symbol;Acc:28361]

Gene Synonyms

MGC2599

Location

Chromosome 13: 30,782,862-30,784,801 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 931 variant alleles and maps to 125 oligo probes.

Gene

This transcript is a product of gene ENSG00000102781.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000380615.3	KATNAL1-001	7551	490aa	ENSP00000369989.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31956	A2A3H2 Q5T558 Q9BW62	NM_032116.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380617.3	KATNAL1-002	1634	490aa	ENSP00000369991.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31956	A2A3H2 Q5T558 Q9BW62	NM_001014380.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441394.1	KATNAL1-003	797	150aa	ENSP00000407792.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T558	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000414289.1	KATNAL1-004	566	153aa	ENSP00000397776.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A3H2 Q5T558	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000480854.1	KATNAL1-005	363	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 363 bps,

Version

ENST00000480854.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000303979 (version 1)

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Transcript: ENST00000480854.1 KATNAL1-005

Summary