Transcript: ENST00000471229.2 ARMCX3-004

Description

armadillo repeat containing, X-linked 3 [Source:HGNC Symbol;Acc:24065]

Gene Synonyms

ALEX3, dJ545K15.2

Location

Chromosome X: 100,878,079-100,881,474 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 12 domains and features, is associated with 1129 variant alleles and maps to 318 oligo probes.

Gene

This transcript is a product of gene ENSG00000102401.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000341189.4	ARMCX3-001	3730	379aa	ENSP00000340672.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14489	H3BM63 H3BV87 Q9UH62	NM_016607.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537169.1	ARMCX3-201	3318	379aa	ENSP00000439032.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14489	H3BM63 H3BV87 Q9UH62	NM_177948.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000471229.2	ARMCX3-004	2051	379aa	ENSP00000454483.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14489	H3BM63 H3BV87 Q9UH62	NM_177947.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000491568.2	ARMCX3-006	973	94aa	ENSP00000457997.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BM63 H3BV87	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000479298.1	ARMCX3-003	637	63aa	ENSP00000454251.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BM63	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000477980.2	ARMCX3-002	833	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467808.1	ARMCX3-005	506	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 1, Transcript length: 2,051 bps, Translation length: 379 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UH62

CCDS

This transcript is a member of the Human CCDS set: CCDS14489

Version

ENST00000471229.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000057571 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000471229.2 ARMCX3-004

Summary