Transcript: ENST00000376759.3 RBM3-003

Description

RNA binding motif (RNP1, RRM) protein 3 [Source:HGNC Symbol;Acc:9900]

Gene Synonyms

IS1-RNPL, RNPL

Location

Chromosome X: 48,432,912-48,437,454 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 8 domains and features, is associated with 2022 variant alleles and maps to 416 oligo probes.

Gene

This transcript is a product of gene ENSG00000102317.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000376759.3	RBM3-003	2162	157aa	ENSP00000365950.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14301	P98179	NM_006743.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000430348.2	RBM3-201	2011	169aa	ENSP00000412764.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GZ81	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000354480.2	RBM3-004	1884	155aa	ENSP00000346473.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9H5V0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376755.1	RBM3-005	1130	157aa	ENSP00000365946.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14301	P98179	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000466764.1	RBM3-009	1375	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491240.1	RBM3-006	951	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485213.1	RBM3-007	947	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488216.1	RBM3-008	835	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491236.1	RBM3-010	729	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489344.1	RBM3-001	724	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490127.1	RBM3-011	567	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472897.1	RBM3-002	501	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 5, Transcript length: 2,162 bps, Translation length: 157 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P98179

CCDS

This transcript is a member of the Human CCDS set: CCDS14301

Version

ENST00000376759.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000060755 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000376759.3 RBM3-003

Summary