Transcript: ENST00000218388.4 TIMP1-001

Description

TIMP metallopeptidase inhibitor 1 [Source:HGNC Symbol;Acc:11820]

Gene Synonyms

CLGI, EPA, EPO, HCI, TIMP

Location

Chromosome X: 47,441,712-47,446,188 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 11 domains and features, is associated with 1608 variant alleles and maps to 337 oligo probes.

Gene

This transcript is a product of gene ENSG00000102265.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000218388.4	TIMP1-001	892	207aa	ENSP00000218388.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14281	P01033 Q5H9A7 Q6FGX5	NM_003254.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377018.2	TIMP1-201	1415	261aa	ENSP00000366217.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DJK3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456754.2	TIMP1-002	1095	136aa	ENSP00000406671.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5H9B5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377017.1	TIMP1-003	626	143aa	ENSP00000366216.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5H9A7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000445623.1	TIMP1-005	595	165aa	ENSP00000410983.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000441738.1	TIMP1-004	341	95aa	ENSP00000405380.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5H9B4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 892 bps, Translation length: 207 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P01033

CCDS

This transcript is a member of the Human CCDS set: CCDS14281

Version

ENST00000218388.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000056423 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000218388.4 TIMP1-001

Summary