Transcript: ENST00000218340.3 RP2-001

Description

retinitis pigmentosa 2 (X-linked recessive) [Source:HGNC Symbol;Acc:10274]

Gene Synonyms

DELXp11.3, NM23-H10, NME10, TBCCD2, XRP2

Location

About this transcript

This transcript has 5 exons, is annotated with 10 domains and features, is associated with 12665 variant alleles and maps to 318 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000218340.3	RP2-001	3803	350aa	ENSP00000218340.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14270	O75695	NM_006915.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 3,803 bps, Translation length: 350 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75695

CCDS

This transcript is a member of the Human CCDS set: CCDS14270

Version

ENST00000218340.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000056375 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.