Transcript: ENST00000478848.1 FMR1-008

Description

fragile X mental retardation 1 [Source:HGNC Symbol;Acc:3775]

Gene Synonyms

FMRP, FRAXA, MGC87458, POF, POF1

Location

Chromosome X: 147,026,213-147,027,235 forward strand.

About this transcript

This transcript has 2 exons, is associated with 401 variant alleles and maps to 154 oligo probes.

Gene

This transcript is a product of gene ENSG00000102081.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000370475.4	FMR1-001	4308	632aa	ENSP00000359506.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14682	Q06787	NM_002024.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000218200.8	FMR1-201	4333	611aa	ENSP00000218200.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55519	G8JL90	NM_001185082.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370471.3	FMR1-202	4125	537aa	ENSP00000359502.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55518	G8JLE9	NM_001185081.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439526.2	FMR1-003	3699	592aa	ENSP00000395923.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W871 G3V0J0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370477.1	FMR1-005	3437	582aa	ENSP00000359508.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MQB8 R9WQY1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000440235.2	FMR1-203	1853	262aa	ENSP00000413764.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W871	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370470.1	FMR1-004	1774	590aa	ENSP00000359501.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q06787	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000334557.6	FMR1-002	1295	297aa	ENSP00000355115.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8IXW7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000492846.1	FMR1-010	815	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495717.1	FMR1-006	776	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478848.1	FMR1-008	541	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475038.1	FMR1-009	497	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463120.1	FMR1-007	470	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 541 bps,

Version

ENST00000478848.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000058662 (version 1)

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Transcript: ENST00000478848.1 FMR1-008

Summary