Transcript: ENST00000380851.5 IDH3B-010

Description

isocitrate dehydrogenase 3 (NAD+) beta [Source:HGNC Symbol;Acc:5385]

Gene Synonyms

H-IDHB, RP46

Location

Chromosome 20: 2,639,041-2,644,865 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 9 domains and features, is associated with 3272 variant alleles and maps to 560 oligo probes.

Gene

This transcript is a product of gene ENSG00000101365.16 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000380843.4	IDH3B-011	1545	385aa	ENSP00000370223.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13032	B4DU38 O43837 Q9UIC5	NM_006899.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380851.5	IDH3B-010	1230	383aa	ENSP00000370232.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13031	B4DU38 O43837	NM_174855.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000488299.1	IDH3B-012	1620	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474315.1	IDH3B-001	1279	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492240.1	IDH3B-007	964	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462967.1	IDH3B-008	959	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491065.1	IDH3B-002	823	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466494.2	IDH3B-004	677	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477689.1	IDH3B-003	608	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466999.1	IDH3B-009	521	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479376.1	IDH3B-005	436	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,230 bps, Translation length: 383 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43837

CCDS

This transcript is a member of the Human CCDS set: CCDS13031

Version

ENST00000380851.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000077612 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000380851.5 IDH3B-010

Summary