Transcript: ENST00000324228.2 ARFRP1-001

Description

ADP-ribosylation factor related protein 1 [Source:HGNC Symbol;Acc:662]

Gene Synonyms

ARL18, ARP, ARP1, Arp1

Location

Chromosome 20: 62,330,809-62,339,190 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 14 domains and features, is associated with 5220 variant alleles and maps to 453 oligo probes.

Gene

This transcript is a product of gene ENSG00000101246.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000359715.5	ARFRP1-007	2491	201aa	ENSP00000352746.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13533	Q13795	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000440854.1	ARFRP1-201	2614	173aa	ENSP00000403942.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46630	Q13795	NM_003224.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000609142.1	ARFRP1-005	1697	173aa	ENSP00000476470.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46630	-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000324228.2	ARFRP1-001	1622	201aa	ENSP00000326884.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13533	Q13795	NM_001267548.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000217224.5	ARFRP1-003	1374	129aa	ENSP00000217224.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000607873.1	ARFRP1-010	1061	154aa	ENSP00000476756.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS68172	-	NM_001267546.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000610136.1	ARFRP1-008	1611	121aa	ENSP00000477237.1	Nonsense mediated decay	CCDS68173	-	-	-
ENST00000485858.1	ARFRP1-004	1250	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000424545.2	ARFRP1-002	384	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000609188.1	ARFRP1-009	225	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000609243.1	ARFRP1-006	5177	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000609537.1	ARFRP1-011	593	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 1,622 bps, Translation length: 201 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13795

CCDS

This transcript is a member of the Human CCDS set: CCDS13533

Version

ENST00000324228.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000080183 (version 1)

Annotation Attributes

dotter confirmed [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000324228.2 ARFRP1-001

Summary