Transcript: ENST00000411611.1 SLC17A9-002

Description

solute carrier family 17 (vesicular nucleotide transporter), member 9 [Source:HGNC Symbol;Acc:16192]

Gene Synonyms

C20orf59, FLJ23412, VNUT

Location

Chromosome 20: 61,584,398-61,588,932 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 8 domains and features, is associated with 2355 variant alleles and maps to 94 oligo probes.

Gene

This transcript is a product of gene ENSG00000101194.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000370351.4	SLC17A9-001	2539	436aa	ENSP00000359376.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42901	Q9BYT1	NM_022082.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370349.3	SLC17A9-007	2594	430aa	ENSP00000359374.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9BYT1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000411611.1	SLC17A9-002	565	152aa	ENSP00000388215.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5W197	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000488738.1	SLC17A9-005	3992	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000459704.2	SLC17A9-004	2015	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483113.1	SLC17A9-006	1624	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487303.1	SLC17A9-003	507	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 565 bps, Translation length: 152 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000411611.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000080101 (version 6)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000411611.1 SLC17A9-002

Summary