Transcript: ENST00000216733.3 EFS-003

Description

embryonal Fyn-associated substrate [Source:HGNC Symbol;Acc:16898]

Gene Synonyms

CAS3, CASS3, EFS1, EFS2, HEFS, SIN

Location

About this transcript

This transcript has 6 exons, is annotated with 17 domains and features, is associated with 4583 variant alleles and maps to 523 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000216733.3	EFS-003	3118	561aa	ENSP00000216733.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9595	O43281	NM_005864.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000351354.3	EFS-001	2704	468aa	ENSP00000340607.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9596	O43281	NM_032459.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000429593.2	EFS-201	1706	392aa	ENSP00000416684.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS61404	B4DJ56	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 3,118 bps, Translation length: 561 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43281

CCDS

This transcript is a member of the Human CCDS set: CCDS9595

Version

ENST00000216733.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000071770 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.