Transcript: ENST00000397147.4 NCF4-002

Description

neutrophil cytosolic factor 4, 40kDa [Source:HGNC Symbol;Acc:7662]

Gene Synonyms

NCF, P40PHOX, SH3PXD4, p40phox

Location

About this transcript

This transcript has 9 exons, is annotated with 19 domains and features, is associated with 8923 variant alleles and maps to 485 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000397147.4	NCF4-002	1641	348aa	ENSP00000380334.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13935	B0QY04 Q15080	NM_013416.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000248899.6	NCF4-001	1396	339aa	ENSP00000248899.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13934	Q15080	NM_000631.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000447071.1	NCF4-004	906	166aa	ENSP00000414958.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0QY04	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000415063.1	NCF4-003	796	212aa	ENSP00000408619.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 1,641 bps, Translation length: 348 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15080

CCDS

This transcript is a member of the Human CCDS set: CCDS13935

Version

ENST00000397147.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000318864 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.