Transcript: ENST00000425028.1 FBXO7-004

Description

F-box protein 7 [Source:HGNC Symbol;Acc:13586]

Gene Synonyms

FBX, FBX07, FBX7, Fbx, PARK15, PKPS

Location

Chromosome 22: 32,870,785-32,894,816 forward strand.

About this transcript

This transcript has 9 exons, is associated with 10644 variant alleles and maps to 451 oligo probes.

Gene

This transcript is a product of gene ENSG00000100225.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000266087.7	FBXO7-001	2195	522aa	ENSP00000266087.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13907	A2A282 F8WBR0 Q9Y3I1	NM_012179.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397426.1	FBXO7-002	1888	408aa	ENSP00000380571.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58806	A2A282 Q9Y3I1	NM_001257990.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000382058.3	FBXO7-201	1758	443aa	ENSP00000371490.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46695	A2A281 A2A282 Q9Y3I1	NM_001033024.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000444207.1	FBXO7-007	747	54aa	ENSP00000404388.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A282	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000452138.1	FBXO7-006	514	129aa	ENSP00000388547.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A281 A2A282	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000425028.1	FBXO7-004	1921	49aa	ENSP00000395823.1	Nonsense mediated decay		F8WDR9	-	-
ENST00000420700.1	FBXO7-003	1900	41aa	ENSP00000406155.1	Nonsense mediated decay		F8WBR0	-	-
ENST00000465418.1	FBXO7-008	413	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492535.1	FBXO7-005	6884	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000484607.1	FBXO7-010	569	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 2, Transcript length: 1,921 bps, Translation length: 49 residues

Version

ENST00000425028.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000129003 (version 6)

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Transcript: ENST00000425028.1 FBXO7-004

Summary