Transcript: ENST00000420442.1 HSCB-007

Description

HscB mitochondrial iron-sulfur cluster co-chaperone [Source:HGNC Symbol;Acc:28913]

Gene Synonyms

DNAJC20, HSC20, JAC1, Jac1, RP3-366L4.2, dJ366L4.2

Location

About this transcript

This transcript has 6 exons, is annotated with 6 domains and features, is associated with 7466 variant alleles and maps to 309 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000216027.3	HSCB-001	1114	235aa	ENSP00000216027.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13845	Q8IWL3	NM_172002.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398941.2	HSCB-003	955	143aa	ENSP00000381914.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0QYH2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000450178.1	HSCB-002	1048	105aa	ENSP00000406284.1	Nonsense mediated decay		F8WBY7	-	-
ENST00000420442.1	HSCB-007	792	143aa	ENSP00000416679.1	Nonsense mediated decay		B0QYH2	-	-
ENST00000495977.1	HSCB-006	846	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485599.1	HSCB-004	656	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483861.1	HSCB-005	563	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 792 bps, Translation length: 143 residues

Version

ENST00000420442.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000321269 (version 1)