Transcript: ENST00000406271.3 CARD10-003

Description

caspase recruitment domain family, member 10 [Source:HGNC Symbol;Acc:16422]

Gene Synonyms

BIMP1, CARMA3

Location

Chromosome 22: 37,886,402-37,905,156 reverse strand.

About this transcript

This transcript has 17 exons, is annotated with 11 domains and features, is associated with 9156 variant alleles and maps to 604 oligo probes.

Gene

This transcript is a product of gene ENSG00000100065.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000403299.1	CARD10-001	4113	1032aa	ENSP00000384570.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13948	B0QYC4 B7Z3N7 Q17RA1 Q9BWT7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000251973.5	CARD10-002	3934	1032aa	ENSP00000251973.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13948	B0QYC4 B7Z3N7 Q17RA1 Q9BWT7	NM_014550.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000406271.3	CARD10-003	3127	746aa	ENSP00000385799.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0QYC4 B7Z3N7 Q8NC81	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000437756.1	CARD10-005	2140	480aa	ENSP00000416239.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0QYC4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000433485.1	CARD10-006	578	192aa	ENSP00000393411.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0QYC3	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000494166.1	CARD10-004	560	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486118.1	CARD10-010	546	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488141.1	CARD10-009	2169	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467812.1	CARD10-008	1910	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000476871.1	CARD10-007	583	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 3,127 bps, Translation length: 746 residues

Version

ENST00000406271.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000318999 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000406271.3 CARD10-003

Summary