Transcript: ENST00000472073.1 DGCR14-003

Description

DiGeorge syndrome critical region gene 14 [Source:HGNC Symbol;Acc:16817]

Gene Synonyms

DGCR13, DGS-G, DGS-H, DGS-I, DGSH, DGSI, ES2, Es2el, SPOGA2, STK22B, TSK2

Location

About this transcript

This transcript has 10 exons, is associated with 5590 variant alleles and maps to 545 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000252137.6	DGCR14-001	5392	476aa	ENSP00000252137.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13756	Q96DF8	NM_022719.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434568.1	DGCR14-002	1808	293aa	ENSP00000388524.1	Nonsense mediated decay		F8WEF8	-	-
ENST00000472073.1	DGCR14-003	2101	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469466.1	DGCR14-004	581	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 0, Transcript length: 2,101 bps,

Version

ENST00000472073.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000316434 (version 2)