Transcript: ENST00000490458.1 SNAP29-002

Description

synaptosomal-associated protein, 29kDa [Source:HGNC Symbol;Acc:11133]

Gene Synonyms

CEDNIK, SNAP-29

Location

About this transcript

This transcript has 2 exons, is associated with 5344 variant alleles and maps to 115 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000215730.7	SNAP29-001	4287	258aa	ENSP00000215730.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13784	C9JAF7 O95721	NM_004782.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439214.1	SNAP29-003	681	160aa	ENSP00000411095.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JAF7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000490458.1	SNAP29-002	972	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 972 bps,

Version

ENST00000490458.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000320147 (version 1)