Transcript: ENST00000556508.1 CEP170B-002

Description

centrosomal protein 170B [Source:HGNC Symbol;Acc:20362]

Gene Synonyms

CEP170R, Cep170R, FAM68C, KIAA0284

Location

Chromosome 14: 105,331,617-105,363,079 forward strand.

About this transcript

This transcript has 18 exons, is annotated with 15 domains and features, is associated with 18835 variant alleles and maps to 729 oligo probes.

Gene

This transcript is a product of gene ENSG00000099814.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000414716.3	CEP170B-001	6705	1554aa	ENSP00000404151.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45175	E9PFC1 Q9Y4F5	NM_001112726.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000453495.1	CEP170B-202	6784	1590aa	ENSP00000407238.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KQR7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000556508.1	CEP170B-002	6683	1519aa	ENSP00000451249.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45176	Q9Y4F5	NM_015005.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000418279.1	CEP170B-201	6548	1484aa	ENSP00000415006.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PFC1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000251181.8	CEP170B-005	846	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 18, Coding exons: 16, Transcript length: 6,683 bps, Translation length: 1,519 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y4F5

CCDS

This transcript is a member of the Human CCDS set: CCDS45176

Version

ENST00000556508.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000410288 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000556508.1 CEP170B-002

Summary