Transcript: ENST00000423465.1 RAB18-005

Description

RAB18, member RAS oncogene family [Source:HGNC Symbol;Acc:14244]

Gene Synonyms

RAB18LI1, WARBM3

Location

Chromosome 10: 27,793,548-27,826,895 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 17 domains and features, is associated with 14001 variant alleles and maps to 496 oligo probes.

Gene

This transcript is a product of gene ENSG00000099246.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000356940.6	RAB18-001	4886	206aa	ENSP00000349415.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7155	B7Z5V3 Q9NP72	NM_021252.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535776.1	RAB18-201	1718	142aa	ENSP00000439321.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58073	Q9NP72	NM_001256412.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423465.1	RAB18-005	873	291aa	ENSP00000407872.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000375802.3	RAB18-003	617	161aa	ENSP00000364960.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5W0J0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000465772.1	RAB18-004	985	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484281.1	RAB18-006	355	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490236.2	RAB18-002	730	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 873 bps, Translation length: 291 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENST00000423465.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000047330 (version 1)

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Transcript: ENST00000423465.1 RAB18-005

Summary