Transcript: ENST00000468252.1 BLNK-007

Description

B-cell linker [Source:HGNC Symbol;Acc:14211]

Gene Synonyms

AGM4, BASH, BLNK-S, BLNK-s, LY57, Ly57, SLP-65, SLP65, bca

Location

Chromosome 10: 97,964,353-97,970,059 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 2225 variant alleles and maps to 107 oligo probes.

Gene

This transcript is a product of gene ENSG00000095585.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000224337.5	BLNK-001	1784	456aa	ENSP00000224337.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7446	Q2MD56 Q8WV28	NM_013314.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371176.2	BLNK-002	1715	433aa	ENSP00000360218.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44464	Q8WV28	NM_001258441.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427367.2	BLNK-202	1710	421aa	ENSP00000391924.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GXS1 Q2MD56	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000413476.2	BLNK-201	1659	404aa	ENSP00000397487.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58091	Q2MD54 Q2MD56 Q8WV28	NM_001258440.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000495266.1	BLNK-003	440	65aa	ENSP00000465741.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EKR2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467799.2	BLNK-004	927	121aa	ENSP00000466331.2	Nonsense mediated decay		Q2MD47	-	-
ENST00000472763.1	BLNK-005	1138	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485193.1	BLNK-006	625	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000468252.1	BLNK-007	557	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 557 bps,

Version

ENST00000468252.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000049599 (version 1)

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Transcript: ENST00000468252.1 BLNK-007

Summary