Transcript: ENST00000209728.4 CDC6-001

Description

cell division cycle 6 [Source:HGNC Symbol;Acc:1744]

Gene Synonyms

CDC18L, HsCDC18, HsCDC6

Location

Chromosome 17: 38,443,885-38,459,171 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 13 domains and features, is associated with 6562 variant alleles and maps to 586 oligo probes.

Gene

This transcript is a product of gene ENSG00000094804.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000209728.4	CDC6-001	3072	560aa	ENSP00000209728.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11365	J3KTI7 J3QLN7 J3QR52 Q99741	NM_001254.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000580824.1	CDC6-003	696	182aa	ENSP00000463635.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KTI7 J3QLN7 J3QR52	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000473555.1	CDC6-002	584	118aa	ENSP00000464047.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KTI7 J3QR52	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000577249.1	CDC6-004	541	100aa	ENSP00000463004.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KTI7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000582402.1	CDC6-005	353	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 3,072 bps, Translation length: 560 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99741

CCDS

This transcript is a member of the Human CCDS set: CCDS11365

Version

ENST00000209728.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000257129 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000209728.4 CDC6-001

Summary