Transcript: ENST00000557288.1 PPP2R3C-016

Description

protein phosphatase 2, regulatory subunit B'', gamma [Source:HGNC Symbol;Acc:17485]

Gene Synonyms

C14orf10, FLJ20644, G4-1, G5PR, G5pr

Location

Chromosome 14: 35,576,509-35,591,190 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 6402 variant alleles and maps to 113 oligo probes.

Gene

This transcript is a product of gene ENSG00000092020.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261475.5	PPP2R3C-001	1839	453aa	ENSP00000261475.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9654	Q969Q6	NM_017917.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555644.1	PPP2R3C-008	1347	190aa	ENSP00000451523.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86US5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557278.1	PPP2R3C-004	896	167aa	ENSP00000450815.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q969Q6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000554361.1	PPP2R3C-019	684	226aa	ENSP00000450716.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V2K1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000555614.1	PPP2R3C-014	676	226aa	ENSP00000451174.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000555219.1	PPP2R3C-015	501	128aa	ENSP00000452173.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YJV0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000557217.1	PPP2R3C-002	1846	22aa	ENSP00000452436.1	Nonsense mediated decay		G3V228	-	-
ENST00000554222.1	PPP2R3C-003	1719	22aa	ENSP00000451416.1	Nonsense mediated decay		G3V228	-	-
ENST00000553273.1	PPP2R3C-005	1402	22aa	ENSP00000451075.1	Nonsense mediated decay		G3V228	-	-
ENST00000554265.1	PPP2R3C-006	1029	22aa	ENSP00000452266.1	Nonsense mediated decay		G3V228	-	-
ENST00000554899.1	PPP2R3C-013	762	22aa	ENSP00000452263.1	Nonsense mediated decay		G3V228	-	-
ENST00000555630.1	PPP2R3C-020	712	134aa	ENSP00000452194.1	Nonsense mediated decay		G3V561	-	-
ENST00000554488.1	PPP2R3C-011	593	22aa	ENSP00000450429.1	Nonsense mediated decay		G3V228	-	-
ENST00000555726.1	PPP2R3C-017	546	19aa	ENSP00000451994.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000557288.1	PPP2R3C-016	492	29aa	ENSP00000451450.1	Nonsense mediated decay		G3V3V5	-	-
ENST00000553282.1	PPP2R3C-018	479	53aa	ENSP00000451423.1	Nonsense mediated decay		G3V3T9	-	-
ENST00000557074.1	PPP2R3C-009	478	41aa	ENSP00000450649.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000554563.1	PPP2R3C-012	469	106aa	ENSP00000452534.1	Nonsense mediated decay		G3V5U8	-	-
ENST00000557773.1	PPP2R3C-007	988	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000556254.1	PPP2R3C-010	913	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 492 bps, Translation length: 29 residues

Version

ENST00000557288.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000410841 (version 2)

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Transcript: ENST00000557288.1 PPP2R3C-016

Summary