Transcript: ENST00000456970.2 ABCC6-003

Description

ATP-binding cassette, sub-family C (CFTR/MRP), member 6 [Source:HGNC Symbol;Acc:57]

Gene Synonyms

ABC34, ARA, EST349056, GACI2, MLP1, MOAT-E, MOATE, MRP6, PXE, PXE1, URG7

Location

Chromosome 16: 16,243,990-16,317,291 reverse strand.

About this transcript

This transcript has 29 exons, is annotated with 29 domains and features, is associated with 34758 variant alleles and maps to 1144 oligo probes.

Gene

This transcript is a product of gene ENSG00000091262.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000205557.7	ABCC6-001	5747	1503aa	ENSP00000205557.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10568	O95255	NM_001171.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000575728.1	ABCC6-006	714	99aa	ENSP00000461686.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58430	O95255	NM_001079528.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456970.2	ABCC6-003	4137	871aa	ENSP00000405002.2	Nonsense mediated decay		E7ESW8	-	-
ENST00000577103.1	ABCC6-007	1381	82aa	ENSP00000459243.1	Nonsense mediated decay		I3L1Z6	-	-
ENST00000574094.1	ABCC6-002	2260	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000576204.1	ABCC6-004	1914	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000576683.1	ABCC6-008	476	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 29, Coding exons: 21, Transcript length: 4,137 bps, Translation length: 871 residues

Version

ENST00000456970.2

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000436243 (version 1)

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Transcript: ENST00000456970.2 ABCC6-003

Summary