Transcript: ENST00000567490.1 AARS-003

Description

alanyl-tRNA synthetase [Source:HGNC Symbol;Acc:20]

Gene Synonyms

CMT2N

Location

Chromosome 16: 70,292,927-70,295,316 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 1214 variant alleles and maps to 60 oligo probes.

Gene

This transcript is a product of gene ENSG00000090861.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261772.8	AARS-001	3477	968aa	ENSP00000261772.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32474	P49588	NM_001605.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000565361.2	AARS-005	839	280aa	ENSP00000455360.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000564359.1	AARS-006	590	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000569790.2	AARS-007	528	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000569825.1	AARS-004	871	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000566969.1	AARS-002	610	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000567490.1	AARS-003	533	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 533 bps,

Version

ENST00000567490.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000435025 (version 1)

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Transcript: ENST00000567490.1 AARS-003

Summary