Transcript: ENST00000261772.8 AARS-001

Description

alanyl-tRNA synthetase [Source:HGNC Symbol;Acc:20]

Gene Synonyms

CMT2N

Location

Chromosome 16: 70,286,198-70,323,446 reverse strand.

About this transcript

This transcript has 21 exons, is annotated with 22 domains and features, is associated with 21029 variant alleles and maps to 675 oligo probes.

Gene

This transcript is a product of gene ENSG00000090861.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261772.8	AARS-001	3477	968aa	ENSP00000261772.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32474	P49588	NM_001605.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000565361.2	AARS-005	839	280aa	ENSP00000455360.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000564359.1	AARS-006	590	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000569790.2	AARS-007	528	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000569825.1	AARS-004	871	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000566969.1	AARS-002	610	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000567490.1	AARS-003	533	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 21, Coding exons: 20, Transcript length: 3,477 bps, Translation length: 968 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P49588

CCDS

This transcript is a member of the Human CCDS set: CCDS32474

Version

ENST00000261772.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000435021 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000261772.8 AARS-001

Summary