Transcript: ENST00000389879.5 CCNK-001

Description

cyclin K [Source:HGNC Symbol;Acc:1596]

Gene Synonyms

CPR4

Location

Chromosome 14: 99,947,746-99,978,777 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 13 domains and features, is associated with 13541 variant alleles and maps to 651 oligo probes.

Gene

This transcript is a product of gene ENSG00000090061.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000389879.5	CCNK-001	3524	580aa	ENSP00000374529.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45160	G3V235 G3V2Q3 O75909	NM_001099402.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555049.1	CCNK-003	1606	378aa	ENSP00000452307.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V235 G3V2Q3 G3V5E1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557441.1	CCNK-006	936	227aa	ENSP00000450792.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V235 G3V2Q3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000555842.1	CCNK-008	811	109aa	ENSP00000450440.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V235	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000557165.1	CCNK-004	955	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000555942.1	CCNK-010	206	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000553865.1	CCNK-005	5627	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000556641.1	CCNK-009	747	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000553636.1	CCNK-007	546	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 3,524 bps, Translation length: 580 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75909

CCDS

This transcript is a member of the Human CCDS set: CCDS45160

Version

ENST00000389879.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000413721 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000389879.5 CCNK-001

Summary