Transcript: ENST00000541049.1 LAG3-004

Description

lymphocyte-activation gene 3 [Source:HGNC Symbol;Acc:6476]

Gene Synonyms

CD223, FDC

Location

About this transcript

This transcript has 2 exons, is associated with 586 variant alleles and maps to 211 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000203629.2	LAG3-001	1974	525aa	ENSP00000203629.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8561	P18627	NM_002286.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441671.2	LAG3-003	1576	360aa	ENSP00000413825.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q7Z643	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538079.1	LAG3-002	2587	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000541049.1	LAG3-004	684	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 684 bps,

Version

ENST00000541049.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000402848 (version 1)