Transcript: ENST00000546394.1 MAPKAPK5-006

Description

mitogen-activated protein kinase-activated protein kinase 5 [Source:HGNC Symbol;Acc:6889]

Gene Synonyms

MAPKAP-K5, MK-5, MK5, PRAK

Location

Chromosome 12: 112,280,292-112,308,111 forward strand.

About this transcript

This transcript has 5 exons, is associated with 11985 variant alleles and maps to 171 oligo probes.

Gene

This transcript is a product of gene ENSG00000089022.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000551404.2	MAPKAPK5-002	1630	473aa	ENSP00000449381.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44975	Q8IW41	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000550735.2	MAPKAPK5-001	2527	471aa	ENSP00000449667.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44976	Q8IW41	NM_139078.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000549875.1	MAPKAPK5-005	974	324aa	ENSP00000473467.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		R4GN33	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000547305.1	MAPKAPK5-003	494	51aa	ENSP00000473541.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		R4GN93	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000553053.1	MAPKAPK5-004	875	74aa	ENSP00000448408.2	Nonsense mediated decay		F8VRP2	-	-
ENST00000546394.1	MAPKAPK5-006	567	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000547067.1	MAPKAPK5-008	1459	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000547915.1	MAPKAPK5-009	1360	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000552111.1	MAPKAPK5-007	954	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000602983.1	MAPKAPK5-010	392	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 567 bps,

Version

ENST00000546394.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000405018 (version 2)

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Transcript: ENST00000546394.1 MAPKAPK5-006

Summary